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Deciphering the photoactivation mechanism of the orange carotenoid protein by time-resolved serial femto


Thesis topic details

General information

Organisation

The French Alternative Energies and Atomic Energy Commission (CEA) is a key player in research, development and innovation in four main areas :
• defence and security,
• nuclear energy (fission and fusion),
• technological research for industry,
• fundamental research in the physical sciences and life sciences.

Drawing on its widely acknowledged expertise, and thanks to its 16000 technicians, engineers, researchers and staff, the CEA actively participates in collaborative projects with a large number of academic and industrial partners.

The CEA is established in ten centers spread throughout France
  

Reference

SL-DRF-24-0550  

Direction

DRF

Thesis topic details

Category

Life Sciences

Thesis topics

Deciphering the photoactivation mechanism of the orange carotenoid protein by time-resolved serial femtosecond crystallography

Contract

Thèse

Job description

The Orange Carotenoid Protein (OCP) is a photoactive protein involved in photoprotection of Cyanobacteria. Recently, a photoactivation mechanism was proposed for OCP, in which the initially excited S2 state yields multiple ps-lived excited states (ICT, S1, S*), but structural evidence is missing. Importantly, only one of these leads to the biologically active OCP-red state on the second timescale. We propose to conduct an ultra-fast time-resolved crystallography experiment at an X-ray free electron laser (XFEL) on OCP to accurately characterize the structures of the short-lived photo-intermediates on the femtosecond to millisecond timescale. In parallel, we will use the new time-resolved crystallography beamline of the ESRF to determine the structures of the later intermediates forming on the millisecond to second timescale. By allowing to visualize protein conformational changes upon photoactivation from the photochemical (hundreds of femtoseconds) to the photobiological timescales (seconds), our integrated structural biology project will allow to (i) test mechanistic hypotheses, (ii) pave the way to a detailed understanding the photophysical properties of OCP, and (iii) open avenues towards its exploitation as an optogenetic component or a regulator of light-uptake in biomimetic photosynthetic systems.

University / doctoral school

Chimie et Sciences du Vivant (EDCSV)
Université Grenoble Alpes

Thesis topic location

Site

Grenoble

Requester

Position start date

01/10/2024

Person to be contacted by the applicant

Colletier Jacques-Philippe colletier@ibs.fr
CNRS
Institut de Biologie Structurale UMR 5075 UGA,CNRS,CEA
Institut de Biologie Structurale
71 AVENUE DES MARTYRS
38044 GRENOBLE CEDEX 9
0457428515

Tutor / Responsible thesis director

Colletier Jacques-Philippe colletier@ibs.fr
CNRS
Institut de Biologie Structurale UMR 5075 UGA,CNRS,CEA
Institut de Biologie Structurale
71 AVENUE DES MARTYRS
38044 GRENOBLE CEDEX 9
0457428515

En savoir plus


https://www.ibs.fr/fr/recherche/assemblage-dynamique-et-reactivite/groupe-dynamique-et-cinetique-des-processus-moleculaires-m-weik/snax/article/presentation