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Towards a detailed understanding of the regulation of gene expression by acetylation and lactylation of


Thesis topic details

General information

Organisation

The French Alternative Energies and Atomic Energy Commission (CEA) is a key player in research, development and innovation in four main areas :
• defence and security,
• nuclear energy (fission and fusion),
• technological research for industry,
• fundamental research in the physical sciences and life sciences.

Drawing on its widely acknowledged expertise, and thanks to its 16000 technicians, engineers, researchers and staff, the CEA actively participates in collaborative projects with a large number of academic and industrial partners.

The CEA is established in ten centers spread throughout France
  

Reference

SL-DRF-25-0457  

Direction

DRF

Thesis topic details

Category

Life Sciences

Thesis topics

Towards a detailed understanding of the regulation of gene expression by acetylation and lactylation of histone proteins

Contract

Thèse

Job description

In eukaryotic cells, DNA is wrapped around histone proteins to form chromatin. Dynamic modification of histones by various chemical structures enables fine regulation of gene expression. Alterations in these complex regulatory mechanisms are at the root of many diseases. Histone lysine acetylation is known to induce gene expression. Other structures can be added to histones, whose effects on transcription remain largely to be elucidated. Most of them, like lactylation discovered in 2019, depend on cellular metabolism. We have begun to study lactylation in the context of murine spermatogenesis. This process of cellular differentiation is a model of choice for studying the regulation of transcription, due to the dramatic changes in chromatin composition and the gene expression program. We have generated novel epigenetic profiles consisting of the genome-wide distribution of acetylated and lactylated marks on three histone H3 lysines. The aim of this thesis is to contribute to the deciphering of the “histone code”, firstly by studying the role of lactylations on the transcriptional program. Secondly, the prediction of chromatin states will be refined by integrating our new data with existing epigenomic data at the two studied cellular stages, within neural network models.

University / doctoral school

Chimie et Sciences du Vivant (EDCSV)
Université Grenoble Alpes

Thesis topic location

Site

Grenoble

Requester

Position start date

01/10/2025

Person to be contacted by the applicant

PFLIEGER Delphine delphine.pflieger@cea.fr
CNRS
UA13 Inserm/CEA/Université Grenoble Alpes
EDYP/BGE/DS/IRIG
CEA de Grenoble
17 rue des Martyrs
38054 GRENOBLE cedex 09
0438782265

Tutor / Responsible thesis director

PFLIEGER Delphine delphine.pflieger@cea.fr
CNRS
UA13 Inserm/CEA/Université Grenoble Alpes
EDYP/BGE/DS/IRIG
CEA de Grenoble
17 rue des Martyrs
38054 GRENOBLE cedex 09
0438782265

En savoir plus

https://www.edyp.fr/web/2019/10/22/integrative-omics/
https://www.bge-lab.fr/Pages/Presentation.aspx